BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029C07LP1|AL429035
(880 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1313 1744 0.0
>3x_Contig1313
Length = 8010
Score = 1744 bits (880), Expect = 0.0
Identities = 880/880 (100%)
Strand = Plus / Minus
Query: 1 gatcaggaagcttaactctagcgacctgtcgctcgccccacagaacctcacccgagaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7136 gatcaggaagcttaactctagcgacctgtcgctcgccccacagaacctcacccgagaacc 7077
Query: 61 acacattacacgccgccagctcccactatactcatcttgcttcccttaagcgttctcacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7076 acacattacacgccgccagctcccactatactcatcttgcttcccttaagcgttctcacg 7017
Query: 121 attcgttcgctgcccttcttcaagagtcttctgattctaattctcattcgaaatcctcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7016 attcgttcgctgcccttcttcaagagtcttctgattctaattctcattcgaaatcctcta 6957
Query: 181 cagttaatgaattgcttgacatgacattcattgtctcatggttttggctttttggctttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6956 cagttaatgaattgcttgacatgacattcattgtctcatggttttggctttttggctttt 6897
Query: 241 gtcttttaaagctatatcaactttacatataaatatacgtcaaaaggggattcattaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6896 gtcttttaaagctatatcaactttacatataaatatacgtcaaaaggggattcattaatt 6837
Query: 301 agaaaattctctttttcaatagttgctattcattatcaatctattcaactcaattggtta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6836 agaaaattctctttttcaatagttgctattcattatcaatctattcaactcaattggtta 6777
Query: 361 ttattttcatctttttgtcatcctaaaccatcaacaatatttaaatatatctgttgctac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6776 ttattttcatctttttgtcatcctaaaccatcaacaatatttaaatatatctgttgctac 6717
Query: 421 attaagagttacttcagaaataacaaaaaaatcgatcaagaattaataaaaatgtctttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6716 attaagagttacttcagaaataacaaaaaaatcgatcaagaattaataaaaatgtctttg 6657
Query: 481 agttcaaaattgactgtcaaggatttggatgtcactggtaaaagagtgttcatcagagtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6656 agttcaaaattgactgtcaaggatttggatgtcactggtaaaagagtgttcatcagagtt 6597
Query: 541 gatttcaacgtcccattggacggtaagaagatcacttccaaccaaagaattgtagcagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6596 gatttcaacgtcccattggacggtaagaagatcacttccaaccaaagaattgtagcagct 6537
Query: 601 ctgcctactattcaatacgttttggaaaagaagccaaaggccattgtcttggcctctcat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6536 ctgcctactattcaatacgttttggaaaagaagccaaaggccattgtcttggcctctcat 6477
Query: 661 ttgggtagaccaaacggtgaagttaacgacaaatactcattggctccagttgccgatgaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6476 ttgggtagaccaaacggtgaagttaacgacaaatactcattggctccagttgccgatgaa 6417
Query: 721 ttgtctagactattgcaaaagccagttactttcttgcatgactgtgttggtgaagaagtc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6416 ttgtctagactattgcaaaagccagttactttcttgcatgactgtgttggtgaagaagtc 6357
Query: 781 accaatgccgttaacaacgctaaggacggtgaagttttcctattggaaaacttgagattc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6356 accaatgccgttaacaacgctaaggacggtgaagttttcctattggaaaacttgagattc 6297
Query: 841 cacatcgaagaagaaggttccagaaaggtggatggtaaca 880
||||||||||||||||||||||||||||||||||||||||
Sbjct: 6296 cacatcgaagaagaaggttccagaaaggtggatggtaaca 6257
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7990
Number of Sequences: 1807
Number of extensions: 7990
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 880
length of database: 10,358,551
effective HSP length: 16
effective length of query: 864
effective length of database: 10,329,639
effective search space: 8924808096
effective search space used: 8924808096
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)